1. Tutorials
  2. Basic tutorials
Materials
Data

This tutorial series covers the basic functionality of J-AST, including image uploads, metadata handling, automated/manual annotation, and running analyses.

Please use the attached data for this tutorial.

Video tutorial

Same as the text tutorials, but in video form

1/6
Video guide
YouTube

Uploading images and setting metadata

This first part of the tutorial explains how to create a project, upload images and add metadata to the uploaded items

2/6
Written guide

Automated image annotation

This tutorial shows how to use automated methods for annotating image regions

3/6
Written guide

Manual image annotation

This tutorial explains the interactive annotation features

4/6
Written guide

Running diskImageR

This tutorial will show how to run diskImageR and how to review its results

5/6
Written guide

MIC detection

This tutorial shows how to apply the MIC detection algorithm

6/6
Written guide