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Arjun Sarkar

Post-doctoral researcher, Sub-group image analysis member
Contact & more info

Curriculum vitae

Main Research Areas

  • Topic of PhD thesis: “Automated Processing of Biomedical Images in Infection Research”

Professional Career

  • since 2025 Postdoctoral researcher in the Applied Systems Biology group, Hans Knöll Institute
  • 2021 -2025 PhD student at the Hans Knöll Institute
  • 2018 – 2021 M.Sc. in Biomedical Engineering at the FH Aachen of Applied Sciences, Aachen, Germany
  • 2017 -2018 Product Specialist am Karl Storz Endoscopy India Private Limited, India
  • 2015 – 2017 Senior Application Engineer am Healthware Private Limited, India
  • 2014 -2015 Service Engineer am South India Surgical Company Limited, India
  • 2010 – 2014 B.Tech in Biomedical Engineering am JIS College of Engineering, India

Publications

2025-09-25

Multiplexed, rapid phenotypic antibiotic susceptibility testing based on angle-resolved light scattering imaging of microfluidic droplets.

Martina Graf, Arjun Sarkar, Carl-Magnus Svensson, Anne-Sophie Munser, Sven Schröder, Elke Müller, Sundar Hengoju, Marc Thilo Figge, Miriam A Rosenbaum#

Journal of Advanced Research

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2025-02-01

Rapid detection of microbial antibiotic susceptibility via deep learning supported analysis of angle-resolved scattered-light images of picoliter droplet cultivations

Sarkar A*, Graf M*, Svensson CM, Munser A-S, Schröder S, Hengoju S, Rosenbaum M, Figge MT

Sensors and Actuators B: Chemical

Open Access
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2024-12-05

The proteomic response of Aspergillus fumigatus to amphotericin B (AmB) reveals the involvement of the RTA-like protein RtaA in AmB resistance

Ammar Abou-Kandil, Sophie Tröger-Görler, Annica Pschibul, Thomas Krüger, Maira Rosin, Franziska Schmidt, Parastoo Akbarimoghaddam, Arjun Sarkar, Zoltán Cseresnyés, Yana Shadkchan, Thorsten Heinekamp, Markus H Gräler, Amelia E Barber, Grit Walther, Marc Thilo Figge, Axel A Brakhage, Nir Osherov, Olaf Kniemeyer

MicroLife

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2024-03-09

Deep learning-based characterization of neutrophil activation phenotypes in ex vivo human Candida blood infections

Sarkar A, Praetorius JP, Figge MT#

Computational and Structural Biotechnology Journal

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2022-10-22

Explainable aI and its applications in healthcare.

Arjun Sarkar#

Springer Nature

Open Access
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2022-05-10

Automated characterisation of neutrophil activation phenotypes in ex vivo human Candida blood infection

Ivan Belyaev, Alessandra Marolda, Jan-Philipp Praetorius, Arjun Sarkar, Anna Medyukhina, Kerstin Hünniger, Oliver Kurzai#, Marc Thilo Figge#

Computational and Structural Biotechnology Journal

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