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MuMoSim: Machine Learning Supported Multi-Model Simulator for Infection Research
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Deep learning-based characterization of neutrophil activation phenotypes in ex vivo human Candida blood infections
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Deep learning supported image analysis of angle-resolved scattered light images of bacteria in microfluidic droplets
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Theory-informed experimental design for model identifiability: what needs to be measured?
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Neutralization of the Candida albicans toxin, candidalysin, blocksepithelial damage and dampens inflammatory responses associated withvulvovaginal candidiasis immunopathogenesis
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Individual-based modeling of daycare centers can predict optimal surveillance strategies against SARS-CoV-2
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Spatial distancing: modeling of a defense mechanism for pathogen immune evasion
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Image-based analysis of Candida albicans infection in a gut-on-chip model
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Investigation of the prognostic value for metabolic and Raman spectroscopic erythrocyte profiling in sepsis
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Spatial distancing: Investigation of a defense mechanism for pathogen immune evasion
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Deep learning supported image analysis of angle-resolved scattered light images of bacteria in microfluidic droplets
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A spatio-temporal model for simulating hyphal growth of filamentous fungal species
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JIPipe: Designing automated image analysis
pipelines without programming -
Mcat: a multispectral cluster analysis toolkit for deep learning-based segmentation and clinical biomarker quantification of MSOT data
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Modeling Candida albicans Complement Regulator Pra1
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Automated Characterization of Neutrophil Activation Phenotypes for Human Candida Bloodstream Infections
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AMIT: A high performance segmentation and tracking framework for migration and confrontation assays
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Automatic segmentation and classification of fungal-infected tissue using Deep Learning
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3D-HyTracer: Quantitative hyphal growth analysis through hyphae-to-graph transormation
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Machine learning supported image analysis of microfluidic droplets
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Algorithm for confrontation assay quantification (ACAQ): Label-free image analysis supported by Hessian filtering
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From raw images to abstract surface models: deconvolution, DeConvTest and DynSPHARM
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MISA++: A standardized interface for automated bioimage analysis
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JIPipe: Designing automated image analysis pipelines without programming
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Virtual whole-blood infection assays
